Hi everybody,
I'm studying every command contained inside recon all to track a probable problem we have with our patients. I've reached mri_ca_label command but the process stop while running and it's not giving me any error, the terminal just show the word "killed", I pasted it here:
Left_Pallidum (13): linear fit = 1.01 x + 0.0 (207 voxels, overlap=1.017) Left_Pallidum (13): linear fit = 1.01 x + 0.0 (207 voxels, peak = 97), gca=97.4 gca peak = 0.27536 (62) mri peak = 0.08851 (78) Right_Hippocampus (53): linear fit = 1.24 x + 0.0 (667 voxels, overlap=0.021) Right_Hippocampus (53): linear fit = 1.24 x + 0.0 (667 voxels, peak = 77), gca=76.6 gca peak = 0.32745 (63) mri peak = 0.09108 (77) Left_Hippocampus (17): linear fit = 1.22 x + 0.0 (655 voxels, overlap=0.253) Left_Hippocampus (17): linear fit = 1.22 x + 0.0 (655 voxels, peak = 77), gca=76.5 gca peak = 0.08597 (105) mri peak = 0.06731 (110) Right_Cerebral_White_Matter (41): linear fit = 1.04 x + 0.0 (15659 voxels, overlap=0.608) Right_Cerebral_White_Matter (41): linear fit = 1.04 x + 0.0 (15659 voxels, peak = 110), gca=109.7 gca peak = 0.09209 (106) mri peak = 0.05510 (99) Left_Cerebral_White_Matter (2): linear fit = 0.99 x + 0.0 (13532 voxels, overlap=0.871) Left_Cerebral_White_Matter (2): linear fit = 0.99 x + 0.0 (13532 voxels, peak = 104), gca=104.4 Killed francesco@francesco-F3JP:~$
I wasn't able to find any log file to find the cause. Anybody can help me with this? Thanks in advice,
Francesco Baldacchini
Hi Francesco
that usually means you ran out of memory.
cheers Bruce On Mon, 7 Apr 2014, Francesco Baldacchini wrote:
Hi everybody,
I'm studying every command contained inside recon all to track a probable problem we have with our patients. I've reached mri_ca_label command but the process stop while running and it's not giving me any error, the terminal just show the word "killed", I pasted it here:
Left_Pallidum (13): linear fit = 1.01 x + 0.0 (207 voxels, overlap=1.017) Left_Pallidum (13): linear fit = 1.01 x + 0.0 (207 voxels, peak = 97), gca=97.4 gca peak = 0.27536 (62) mri peak = 0.08851 (78) Right_Hippocampus (53): linear fit = 1.24 x + 0.0 (667 voxels, overlap=0.021) Right_Hippocampus (53): linear fit = 1.24 x + 0.0 (667 voxels, peak = 77), gca=76.6 gca peak = 0.32745 (63) mri peak = 0.09108 (77) Left_Hippocampus (17): linear fit = 1.22 x + 0.0 (655 voxels, overlap=0.253) Left_Hippocampus (17): linear fit = 1.22 x + 0.0 (655 voxels, peak = 77), gca=76.5 gca peak = 0.08597 (105) mri peak = 0.06731 (110) Right_Cerebral_White_Matter (41): linear fit = 1.04 x + 0.0 (15659 voxels, overlap=0.608) Right_Cerebral_White_Matter (41): linear fit = 1.04 x + 0.0 (15659 voxels, peak = 110), gca=109.7 gca peak = 0.09209 (106) mri peak = 0.05510 (99) Left_Cerebral_White_Matter (2): linear fit = 0.99 x + 0.0 (13532 voxels, overlap=0.871) Left_Cerebral_White_Matter (2): linear fit = 0.99 x + 0.0 (13532 voxels, peak = 104), gca=104.4 Killed francesco@francesco-F3JP:~$
I wasn't able to find any log file to find the cause. Anybody can help me with this? Thanks in advice,
Francesco Baldacchini
freesurfer@nmr.mgh.harvard.edu