Date: Mon, 2 Apr 2018 14:55:47 -0400 From: Douglas Greve dgreve@mgh.harvard.edu Subject: Re: [Freesurfer] mirroring fsaverage labels between hemispheres
If you have a label defined on the lh or rh of fsaverage, you can map it to the contralateral hemi with something like
mris_apply_reg --src-label lh.your.label --streg lh.sphere.left_right rh.sphere.left_right --trg rh.your.label
where the left_right files are in fsaverage/surf
My fsaverage doesn't seem to have those registrations (we're still on 5.3) - I have lh.sphere, lh.sphere.reg, and lh.sphere.reg.avg but nothing with the .left_right suffix.
-a
you can generate them with
cd $FREESURFER_HOME/subjects/fsaverage/surf
mris_left_right_register lh.sphere rh.sphere lh.sphere.left_right rh.sphere.left_right
should take less than an hour to run
On 04/03/2018 03:28 PM, Abigail Noyce wrote:
Date: Mon, 2 Apr 2018 14:55:47 -0400 From: Douglas Greve <dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu>> Subject: Re: [Freesurfer] mirroring fsaverage labels between hemispheres If you have a label defined on the lh or rh of fsaverage, you can map it to the contralateral hemi with something like mris_apply_reg --src-label lh.your.label --streg lh.sphere.left_right rh.sphere.left_right --trg rh.your.label where the left_right files are in fsaverage/surfMy fsaverage doesn't seem to have those registrations (we're still on 5.3) - I have lh.sphere, lh.sphere.reg, and lh.sphere.reg.avg but nothing with the .left_right suffix.
-a
Abigail L. Noyce, Ph.D. Psychological & Brain Sciences Boston University
anoyce@bu.edu mailto:anoyce@bu.edu 617-440-3640
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