Hi,
I've recently used freesurfer after installing MINC Tool Kit, and got some problem. Seeing the log file, the problem seems to be in mri_nu_correct.mni with the following command.
mri_nu_correct.mni --n 1 --proto-iters 1000 --distance 50 --no-rescale --i orig.mgz --o orig_nu.mgz
I've attached the log file and error.log when I've done this separately. Before installing MINC Toolkit, I've done the process without problem for sure, so I think MINC-toolkit caused some error.. I found some threads about the error in mri_nu_correct.mni, but I couldn't find the answer. Does somebody has any solution or suggestion for this?
Best, Ikko
freesurfer@nmr.mgh.harvard.edu