Hi Cat, you can use something like:

mri_segstats --i y.mgh --slabel fsaverage lh your.label --id 1 --avgwf avgwf.dat where y.mgh is the file created by qdec that has stack of subjects' data avgwf.dat will have a value for each subject that is the mean over your ROI

doug

On 06/18/2012 06:56 PM, Cat Chong wrote:

Hello Freesurfers,

I have created an ROI label for 80 subjects in qdec. My question is the following: Is there a command that will create a .stats file for all my subjects rather than using the below command on each person individually? mris_anatomical_stats -l rh.ento.label \ -t rh.thickness -b -f 4000/stats/rh.ento.stats 4000 rh best regards, Cat

---

Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer