thanks guys!

On Fri, Apr 28, 2017 at 4:16 PM, Douglas N Greve greve@nmr.mgh.harvard.edu wrote:

No, you can do it with

mri_binarize --i aparc+aseg.mgz --match ID --o roi.ID.nii.gz

where ID is the parc id from the FreeSurferColorLUT.txt

On 04/28/2017 06:58 PM, VA Research wrote:

...

Does freesurfer output individual roi volume masks for each of the cortical parcellations in aparc+aseg?

thanks

Joseph Veliz VA Hospital West LA

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