See attached image for reference. Large area has been incorrectly segmented as WM, also WM surface has completely been skipped over. Planning to remove segmentation in that area and run recon-all again, is this correct or should something else be done to alleviate issue.
Worth noting this issue is only in one hemisphere.
Hi Jonathon
that's pretty bad. Did the skull stripping fail? If you upload the subject I'll take a look Bruce
On Thu, 25 Apr 2013, Jonathan Holt wrote:
See attached image for reference. Large area has been incorrectly segmented as WM, also WM surface has completely been skipped over. Planning to remove segmentation in that area and run recon-all again, is this correct or should something else be done to alleviate issue. Worth noting this issue is only in one hemisphere.
freesurfer@nmr.mgh.harvard.edu
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Bruce Fischl -
Jonathan Holt