Hi everybody, this is Jared over at the Brigham. Quick question for anyone who knows. I am trying to rebuild a subcortical atlas using the script rebuild_gca_atlas.csh. When calling the script I almost immediately get the error "psubmit: Command not found." I would like to get this working before I leave work today, so if anyone knows something about this error please let me know as soon as possible.
It would be pbsubmit and would only work if you are logged into seychelles.
On Thu, 2 Oct 2008, Jared Price wrote:
Hi everybody, this is Jared over at the Brigham. Quick question for anyone who knows. I am trying to rebuild a subcortical atlas using the script rebuild_gca_atlas.csh. When calling the script I almost immediately get the error "psubmit: Command not found." I would like to get this working before I leave work today, so if anyone knows something about this error please let me know as soon as possible. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Hi Jared,
that script is for execution here at MGH using our cluster. pbsubmit is a command to submit a job to our processor farm, so you'll need to modify it to use whatever cluster you have access to.
cheers, Bruce
On Thu, 2 Oct 2008, Jared Price wrote:
Hi everybody, this is Jared over at the Brigham. Quick question for anyone who knows. I am trying to rebuild a subcortical atlas using the script rebuild_gca_atlas.csh. When calling the script I almost immediately get the error "psubmit: Command not found." I would like to get this working before I leave work today, so if anyone knows something about this error please let me know as soon as possible. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu
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Allison Stevens -
Bruce Fischl -
Jared Price