Hi freesurfers,
I get this error when I load qdec.table.dat. Is it something wrong or should I ignore it? Verifying subject data.sh: 1: Syntax error: Bad fd number ERROR: QdecProject::VerifySubjects: Couldn't find subject '6027' in SUBJECTS_DIR .sh: 1: Syntax error: Bad fd number ERROR: QdecProject::VerifySubjects: Couldn't find subject '6209' in SUBJECTS_DIR .sh: 1: Syntax error: Bad fd number ERROR: QdecProject::VerifySubjects: Couldn't find subject '6243' in SUBJECTS_DIR . . . ERROR: QdecProject::VerifySubjects: Couldn't find subject '6052' in SUBJECTS_DIR Too many subjects not found!
Someone else complained about the same problem but there was no reply: http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg08288.html
My qdec.table looks like this: fsid diagnosis Cage 6027 ABN -1.39 6209 ABN 2.61 . .
Thanks! Mihaela
Hello, I am re-posting this since I haven't got an answer yet.
Thanks! Mihaela
On Fri, Feb 21, 2014 at 3:55 PM, Mihaela Stefan mikaelastephan@gmail.comwrote:
Hi freesurfers,
I get this error when I load qdec.table.dat. Is it something wrong or should I ignore it? Verifying subject data.sh: 1: Syntax error: Bad fd number ERROR: QdecProject::VerifySubjects: Couldn't find subject '6027' in SUBJECTS_DIR .sh: 1: Syntax error: Bad fd number ERROR: QdecProject::VerifySubjects: Couldn't find subject '6209' in SUBJECTS_DIR .sh: 1: Syntax error: Bad fd number ERROR: QdecProject::VerifySubjects: Couldn't find subject '6243' in SUBJECTS_DIR . . . ERROR: QdecProject::VerifySubjects: Couldn't find subject '6052' in SUBJECTS_DIR Too many subjects not found!
Someone else complained about the same problem but there was no reply: http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg08288.html
My qdec.table looks like this: fsid diagnosis Cage 6027 ABN -1.39 6209 ABN 2.61 . .
Thanks! Mihaela
Are those subjects in your SUBJECTS_DIR?
What is the output of ls $SUBJECTS_DIR ?
On Tue, Mar 4, 2014 at 1:10 PM, Mihaela Stefan mikaelastephan@gmail.com wrote:
Hello, I am re-posting this since I haven't got an answer yet.
Thanks! Mihaela
On Fri, Feb 21, 2014 at 3:55 PM, Mihaela Stefan mikaelastephan@gmail.com wrote:
Hi freesurfers,
I get this error when I load qdec.table.dat. Is it something wrong or should I ignore it? Verifying subject data.sh: 1: Syntax error: Bad fd number ERROR: QdecProject::VerifySubjects: Couldn't find subject '6027' in SUBJECTS_DIR .sh: 1: Syntax error: Bad fd number ERROR: QdecProject::VerifySubjects: Couldn't find subject '6209' in SUBJECTS_DIR .sh: 1: Syntax error: Bad fd number ERROR: QdecProject::VerifySubjects: Couldn't find subject '6243' in SUBJECTS_DIR . . . ERROR: QdecProject::VerifySubjects: Couldn't find subject '6052' in SUBJECTS_DIR Too many subjects not found!
Someone else complained about the same problem but there was no reply: http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg08288.html
My qdec.table looks like this: fsid diagnosis Cage 6027 ABN -1.39 6209 ABN 2.61 . .
Thanks! Mihaela
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