Dear FS team,
I am trying to find the centroid using mri_surfcluster using the following command but I am getting the same coordinate for all labels. I couldn't quiet understand what's wrong. Your suggestion would be really appreciated.
NOTE: The coordinates differs for hemisphere.
mri_surfcluster --in ./S/surf/rh.thickness --clabel ./S/centroid/rh.frontalpole.label --sum ./S/centroid/sum.rh.6.label --centroid --thmin 0 --hemi rh --subject S
Thank you.
Regards, Nabin
Set the threshold to be something non-zero (eg, ---thmin .00000001)
On 05/17/2016 10:47 AM, Nabin Koirala wrote:
Dear FS team,
I am trying to find the centroid using mri_surfcluster using the following command but I am getting the same coordinate for all labels. I couldn't quiet understand what's wrong. Your suggestion would be really appreciated.
NOTE: The coordinates differs for hemisphere.
mri_surfcluster --in ./S/surf/rh.thickness --clabel ./S/centroid/rh.frontalpole.label --sum ./S/centroid/sum.rh.6.label --centroid --thmin 0 --hemi rh --subject S
Thank you.
Regards, Nabin
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Many thanks Doug.
Regards, Nabin
On Tue, May 17, 2016 at 7:04 PM, Douglas N Greve greve@nmr.mgh.harvard.edu wrote:
Set the threshold to be something non-zero (eg, ---thmin .00000001)
On 05/17/2016 10:47 AM, Nabin Koirala wrote:
Dear FS team,
I am trying to find the centroid using mri_surfcluster using the following command but I am getting the same coordinate for all labels. I couldn't quiet understand what's wrong. Your suggestion would be really appreciated.
NOTE: The coordinates differs for hemisphere.
mri_surfcluster --in ./S/surf/rh.thickness --clabel ./S/centroid/rh.frontalpole.label --sum ./S/centroid/sum.rh.6.label --centroid --thmin 0 --hemi rh --subject S
Thank you.
Regards, Nabin
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