Hi, I use freesurfer-Linux-centos4_x86_64-stable-pub-v3.0.3 For a subject, in folder ${SUBJECTS_HOME}/label, I can find two annotation file lh.aparc.a2005s.annot lh.aparc.annot
In freesufer home, I can find a file surface_labels.txt. It looks like 0 Unknown 0 0 0 0 1 G_cingularis 25 60 60 0 2 G_cuneus 180 20 20 0 3 G_frontalis_inf-pars_opercularis 220 20 100 0 4 G_frontalis_inf-pars_orbitalis 140 60 60 0 5 G_frontalis_inf-pars_triangularis 180 220 140 0 6 G_frontalis_medius 140 100 180 0 7 G_frontalis_sup-pars_lateralis 180 20 140 0 8 G_frontalis_sup-pars_medialis 180 140 100 0 9 G_frontomarginalis 140 20 140 0 10 G_hippocampi 25 180 20 0
My question is whether this file is for lh.aparc.a2005s.annot or lh.aparc.annot? If this contains structure name for lh.aparc.a2005s.annot, where is the corresponding label list file for lh.aparc.annot. Thank you Ron
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There are .ctab files in the stats dir that list all the structures.
doug
R. Chen wrote:
Hi, I use freesurfer-Linux-centos4_x86_64-stable-pub-v3.0.3 For a subject, in folder ${SUBJECTS_HOME}/label, I can find two annotation file lh.aparc.a2005s.annot lh.aparc.annot
In freesufer home, I can find a file surface_labels.txt. It looks like 0 Unknown 0 0 0 0 1 G_cingularis 25 60 60 0 2 G_cuneus 180 20 20 0 3 G_frontalis_inf-pars_opercularis 220 20 100 0 4 G_frontalis_inf-pars_orbitalis 140 60 60 0 5 G_frontalis_inf-pars_triangularis 180 220 140 0 6 G_frontalis_medius 140 100 180 0 7 G_frontalis_sup-pars_lateralis 180 20 140 0 8 G_frontalis_sup-pars_medialis 180 140 100 0 9 G_frontomarginalis 140 20 140 0 10 G_hippocampi 25 180 20 0
My question is whether this file is for lh.aparc.a2005s.annot or lh.aparc.annot? If this contains structure name for lh.aparc.a2005s.annot, where is the corresponding label list file for lh.aparc.annot. Thank you Ron
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