Hi Doug,
At the end of my FSFAST analysis, I would like to plot the Canonical HRF shape generated by FSFAST for my events. I have found this thread: https://mail.nmr.mgh.harvard.edu/pipermail/freesurfer/2013-July/031902.html
but I am not sure if I understand this line: "plot(X.runflac(1).flac.ev(2).tirf, X.runflac(1).flac.ev(2).Xirf)"
Could you please clarify how to plot the Canonical HRF that was generated by FSFAST?
Thank you,
Sarah
Just one clarification, this is for first level analysis (individual subjects).
Thanks
On Wed, Apr 11, 2018 at 9:54 AM, Sarah Cole coleashley00@gmail.com wrote:
Hi Doug,
At the end of my FSFAST analysis, I would like to plot the Canonical HRF shape generated by FSFAST for my events. I have found this thread: https://mail.nmr.mgh.harvard.edu/pipermail/freesurfer/2013- July/031902.html
but I am not sure if I understand this line: " plot(X.runflac(1).flac.ev(2).tirf, X.runflac(1).flac.ev(2).Xirf)"
Could you please clarify how to plot the Canonical HRF that was generated by FSFAST?
Thank you,
Sarah
X.runflac(1).flac.ev(2).tirf is the time samples (eg, 0 to 30 sec)
X.runflac(1).flac.ev(2).Xirf is the actual HRF
If you are using the spmhrf, you can look at the matlab function fast_spmhrf
On 04/11/2018 10:56 AM, Sarah Cole wrote:
Just one clarification, this is for first level analysis (individual subjects).
Thanks
On Wed, Apr 11, 2018 at 9:54 AM, Sarah Cole <coleashley00@gmail.com mailto:coleashley00@gmail.com> wrote:
Hi Doug, At the end of my FSFAST analysis, I would like to plot the Canonical HRF shape generated by FSFAST for my events. I have found this thread: https://mail.nmr.mgh.harvard.edu/pipermail/freesurfer/2013-July/031902.html <https://mail.nmr.mgh.harvard.edu/pipermail/freesurfer/2013-July/031902.html> but I am not sure if I understand this line: "plot(X.runflac(1).flac.ev(2).tirf, X.runflac(1).flac.ev(2).Xirf)" Could you please clarify how to plot the Canonical HRF that was generated by FSFAST? Thank you, Sarah
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