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Hello,
I accidentally renamed my fsaverage directory when I was renaming my subjects' directories. Since I was still in the process of running subjects, a new fsaverage directory was automatically created. Now I have two fsaverage directories that each have a different subset of my participants, but I'd like there to be one directory that has all my participants. Is there any command that I could run that would generate a new fsaverage from subjects in the same output directory?
Thanks, Ryan Wales
Hi Ryan
the fsaverage we distribute with freesurfer is static, not created from your study (unless you do so explicitly with the make_average_subject script). What is different between the old and new ones?
cheers Bruce On Tue, 27 Nov 2018, Ryan Wales wrote:
External Email - Use Caution
Hello, I accidentally renamed my fsaverage directory when I was renaming my subjects' directories. Since I was still in the process of running subjects, a new fsaverage directory was automatically created. Now I have two fsaverage directories that each have a different subset of my participants, but I'd like there to be one directory that has all my participants. Is there any command that I could run that would generate a new fsaverage from subjects in the same output directory?
Thanks, Ryan Wales
-- Ryan Wales Graduate Student Cognition and Motor Control Neuroscience Laboratory Integrative Neuroscience Psychology Department Stony Brook University E-mail: ryan.wales@stonybrook.edu
freesurfer@nmr.mgh.harvard.edu