it looks like it failed trying to write the (new) file: aseg.auto_noCCseg.label_intensities.txt

is the disk full? Do you have write access the this file?

cheers, Bruce On Thu, 20 Aug 2009, Hui Zheng wrote:

Hi freesurfer,

We need some technical support here. The dataset was processed successfully using earlier version. But it failed for the lastest 4.50 FS. Here's the message before the process ended.

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Fourth_Ventricle (15): linear fit = 0.68 x + 0.0 (768 voxels, overlap=0.418) Fourth_Ventricle (15): linear fit = 0.68 x + 0.0 (768 voxels, peak = 13), gca=12.8 gca peak Unknown = 0.94427 ( 0) gca peak Left_Inf_Lat_Vent = 0.31795 (35) gca peak CSF = 0.21286 (38) gca peak Left_Accumbens_area = 0.43211 (73) gca peak Left_VentralDC = 0.15967 (92) gca peak Left_undetermined = 1.00000 (35) gca peak Left_vessel = 0.64914 (62) gca peak Left_choroid_plexus = 0.09084 (48) gca peak Right_Inf_Lat_Vent = 0.30751 (31) gca peak Right_Accumbens_area = 0.30024 (83) gca peak Right_vessel = 0.83418 (60) gca peak Right_choroid_plexus = 0.10189 (48) gca peak Fifth_Ventricle = 0.81716 (35) gca peak WM_hypointensities = 0.15205 (86) gca peak non_WM_hypointensities = 0.08849 (55) gca peak Optic_Chiasm = 0.34859 (76) mri_ca_label GCA sequential renormalization: label 28 not consistently computed.

not using caudate to estimate GM means setting label Right_VentralDC based on Left_VentralDC = 1.15 x + 0 estimating mean gm scale to be 1.01 x + 0.0 estimating mean wm scale to be 1.00 x + 0.0 estimating mean csf scale to be 0.86 x + 0.0 saving intensity scales to aseg.auto_noCCseg.label_intensities.txt Linux neuron 2.6.9-42.ELsmp #1 SMP Tue Aug 15 10:35:26 BST 2006 x86_64 x86_64 x86_64 GNU/Linux

recon-all exited with ERRORS at Thu Aug 20 10:23:28 SGT 2009

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Any idea why? Thanks in advance. Zheng Hui

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