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Hi Douglas,

Thank you very much for answering. I would like to use FreeSurfer statistics but I do not have experience with this software and I would highly appreciate you could help me with this part. How to set up the statistic I want that is an ANOVA with 3 different groups two see if there are differences between them, and if there is statistical significance, then how to manage to see where is the main effect. Best regards, Rosalia

2018-05-23 18:12 GMT+02:00 Douglas N. Greve dgreve@mgh.harvard.edu:

Do you mean gfeat? You can take the stack created by mris_preproc and use that as input, but you won't be able to do clusterwise correction for multiple comparisons

On 05/21/2018 02:20 PM, Rosalia Dacosta Aguayo wrote:

...

Dear Experts,

I would like to run statistical analyses with the output of cortical thickness. The problem is that I would like to do it with FSL as I have more experience. Any one of you could tell me which are the two outputs (right and left hemisphere) I should consider to run the statistics?

Best regard, Rosalia

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