I have hand drawn labels that I want to find volumes for. I used mri_label2vol to create a .mgz mask of the label and am now using mri_label_volume to extract the volumes. it looks like the -s flag should output in a spreadsheet (I am assuming similar to asegstats2table) but i cant seem to get an output other than what i get in my terminal window
example command line mri_label_volume mri/test/mgz 1 2 -s HRDEVtest.txt
thanks, becca
Hi Becca,
try putting the -s first:
mri_label_volume -s HRDEVtest.txt mri/test/mgz 1 2
cheers Bruce
On Wed, 31 Mar 2010, Rebecca Dautoff wrote:
I have hand drawn labels that I want to find volumes for. I used mri_label2vol to create a .mgz mask of the label and am now using mri_label_volume to extract the volumes. it looks like the -s flag should output in a spreadsheet (I am assuming similar to asegstats2table) but i cant seem to get an output other than what i get in my terminal window
example command line mri_label_volume mri/test/mgz 1 2 -s HRDEVtest.txt
thanks, becca _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu