Look here, example #9 http://surfer.nmr.mgh.harvard.edu/fswiki/CoordinateSystems

On 3/14/19 5:01 AM, Tim Hahn wrote:

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Dear Freesurfer experts,

as far as I understand, Freesurfer employs the Desikan-Killiany Atlas (by default) to compute the various parameters based on the aseg and aparc files. For my analysis, I now need the Desikan-Killiany Atlas ROI mask(s) (cortical and subcortical) in MNI or Talairach space. Is there any way to obtain these masks, e.g. by converting aseg/aparc files or by downloading them somewhere?

Thanks a lot for your help.

Best,

Tim

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