Issue opening .dmg file for installing freesurfer patch/code addition for brainstem. Error is "image not recognized"
Hello,
I'm trying to segment the brainstem into subparts. I found online for freesurfer 5.3 you can use the following link to install the need codes:
ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/dev/
which was from the following freesurfer question/solution:
http://www.mail-archive.com/freesurfer%40nmr.mgh.harvard.edu/msg42064.html
However, when I open the ftp as a guest and try to open the .dmg file I get the error "image not recognized". Looking into why this happens it sounds like the download went bad. I've tried re-downloading the file a few times and am now wondering if the uploaded file was bad? Is there another solution so I can segment the brainstem?
Thank you for your help,
Jon
My guess is that you are using Safari on a Mac OSX Machine? If so, I have observed that Safari has strange behavior with ftp links. Can you try using another browser like Firefox or Chrome? Or, you can download by typing the following command in a terminal window:
$> curl -O ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/dev/freesurfer-Darwin-OSX-dev.dmg
Hope this helps.
-Zeke
Hello,
I'm trying to segment the brainstem into subparts. I found online for freesurfer 5.3 you can use the following link to install the need codes:
ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/dev/
which was from the following freesurfer question/solution:
http://www.mail-archive.com/freesurfer%40nmr.mgh.harvard.edu/msg42064.html
However, when I open the ftp as a guest and try to open the .dmg file I get the error "image not recognized". Looking into why this happens it sounds like the download went bad. I've tried re-downloading the file a few times and am now wondering if the uploaded file was bad? Is there another solution so I can segment the brainstem?
Thank you for your help,
Jon _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
That was the issue. Thank you!
Best,
Jonathan Plasencia Graduate Student NSF Graduate Research Fellow *School of Biological and Health Systems Engineering* *Arizona State University* Email: jplasenc@asu.edu Phone: (480)861-7017
On Fri, Oct 23, 2015 at 8:17 AM, zkaufman@nmr.mgh.harvard.edu wrote:
My guess is that you are using Safari on a Mac OSX Machine? If so, I have observed that Safari has strange behavior with ftp links. Can you try using another browser like Firefox or Chrome? Or, you can download by typing the following command in a terminal window:
$> curl -O
ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/dev/freesurfer-Darwin-OSX-dev.dmg
Hope this helps.
-Zeke
Hello,
I'm trying to segment the brainstem into subparts. I found online for freesurfer 5.3 you can use the following link to install the need codes:
ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/dev/
which was from the following freesurfer question/solution:
http://www.mail-archive.com/freesurfer%40nmr.mgh.harvard.edu/msg42064.html
However, when I open the ftp as a guest and try to open the .dmg file I get the error "image not recognized". Looking into why this happens it sounds like the download went bad. I've tried re-downloading the file a few
times
and am now wondering if the uploaded file was bad? Is there another solution so I can segment the brainstem?
Thank you for your help,
Jon _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
freesurfer@nmr.mgh.harvard.edu
-
Jonathan Plasencia -
zkaufman＠nmr.mgh.harvard.edu