Hi all

I am running a seed to whole brain connectivity analysis. I am using the labels that I have made from functional ROIs.

When I run fcseed-config, It makes the configuration file but not the .dat files.

Here is my command:

fcseed-config -segid 1 -seg $SUBJECTS_DIR/${subj}/mri/lh.DIPS_sup2018.mgz -segid 1 -seg $SUBJECTS_DIR/${subj}/mri/lh.DIPS_inf2018.mgz -segid 1 -seg $SUBJECTS_DIR/${subj}/mri/rh.DIPS.2018.mgz -fcname bilateral_DIPS.dat -fsd rest -rlf restruns -mean -cfg ../all_subjects/${subj}/bilateral_DIPS.config -overwrite

I appreciate if someone tells me how to fix it.

Thanks Mona

Zahra (Mona) Nasiriavanaki

Postdoctoral Research Fellow

Martinos Center for Biomedical Imaging

Massachusetts General Hospital

149 13th Street, 149-2615

Charlestown, MA, USA, 02129