Hi FreeSurfer expert,I have a problem with command "recon-all". In recon-all.log I can read:«The physical sizes are (256.00 mm, 256.00 mm, 312.00 mm), which cannot fit in 256^3 mm^3 volume.The resulting volume will have 312 slices.If you find problems, please let us know (freesurfer@nmr.mgh.harvard.edu).»I hope are there anyone to help me.Thank for your help.Andrea
Hi Andrea
what size are your voxels? Do you really need an FOV that big? If not, you could extract the central 256mm using mri_extract. And I believe this is just a warning - does recon-all complete?
cheers Bruce
On Wed, 9 Apr 2014, Andrea Tateo wrote:
Hi FreeSurfer expert,
I have a problem with command "recon-all".
In recon-all.log I can read:
«The physical sizes are (256.00 mm, 256.00 mm, 312.00 mm), which cannot fit in 256^3 mm^3 volume.
The resulting volume will have 312 slices.
If you find problems, please let us know (freesurfer@nmr.mgh.harvard.edu).»
I hope are there anyone to help me.
Thank for your help.
Andrea
freesurfer@nmr.mgh.harvard.edu