Hi everyone,
my name's Andy, I am a researcher in UCLA brain mapping group using Freesurfer we successfully generated the Surface or the vervet monkey brain, and our next step is to perform a surface segmentation using an .gcs file we created by hand. If there's anyway to flip the freesurfer format surface like .pial, .white, we'd only need one .gcs file for both hemisphere and that'd save us a lot of time. I tried using mris_transform with a xfm file, but the results turned out very weird. thanks in advance for the help
Andy
Hi Andy,
I think mris_reverse will do this.
cheers, Bruce On Thu, 21 May 2009 xforever@ucla.edu wrote:
Hi everyone,
my name's Andy, I am a researcher in UCLA brain mapping group using Freesurfer we successfully generated the Surface or the vervet monkey brain, and our next step is to perform a surface segmentation using an .gcs file we created by hand. If there's anyway to flip the freesurfer format surface like .pial, .white, we'd only need one .gcs file for both hemisphere and that'd save us a lot of time. I tried using mris_transform with a xfm file, but the results turned out very weird. thanks in advance for the help
Andy _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
what do you mean by "flip"? left-right reversal?
xforever@ucla.edu wrote:
Hi everyone,
my name's Andy, I am a researcher in UCLA brain mapping group using Freesurfer we successfully generated the Surface or the vervet monkey brain, and our next step is to perform a surface segmentation using an .gcs file we created by hand. If there's anyway to flip the freesurfer format surface like .pial, .white, we'd only need one .gcs file for both hemisphere and that'd save us a lot of time. I tried using mris_transform with a xfm file, but the results turned out very weird. thanks in advance for the help
Andy _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu