Hi all, Sourcing stable3, using tksurfer, does anyone know how to load more than one overlay at a time from the command line? (something like: tksurfer <subject> <hemi> <surface> -overlay1 ??? -overlay2 ??? overlay3 ???) Does this require scripting w/ tksurfer? Cameron
Yes, you can do it with scripting. Start by checking out this page:
http://surfer.nmr.mgh.harvard.edu/fswiki/TkSurferGuide_2fTkSurferScripting_2...
In your case, if your overlay files are volumes, you should use the function sclv_read_from_volume instead of sclv_read_from_dotw. Reference for scripting commands is here:
http://surfer.nmr.mgh.harvard.edu/fswiki/TkSurferGuide_2fTkSurferScripting_2...
On Fri, 2007-10-05 at 13:52 -0400, Cameron Ellis wrote:
Hi all, Sourcing stable3, using tksurfer, does anyone know how to load more than one overlay at a time from the command line? (something like: tksurfer <subject> <hemi> <surface> -overlay1 ??? -overlay2 ??? overlay3 ???) Does this require scripting w/ tksurfer? Cameron
Another thing you can do is to concatenate the overlays (mri_concat) and load the concat into tksurfer as a single overlay
Kevin Teich wrote:
Yes, you can do it with scripting. Start by checking out this page:
http://surfer.nmr.mgh.harvard.edu/fswiki/TkSurferGuide_2fTkSurferScripting_2...
In your case, if your overlay files are volumes, you should use the function sclv_read_from_volume instead of sclv_read_from_dotw. Reference for scripting commands is here:
http://surfer.nmr.mgh.harvard.edu/fswiki/TkSurferGuide_2fTkSurferScripting_2...
On Fri, 2007-10-05 at 13:52 -0400, Cameron Ellis wrote:
Hi all, Sourcing stable3, using tksurfer, does anyone know how to load more than one overlay at a time from the command line? (something like: tksurfer <subject> <hemi> <surface> -overlay1 ??? -overlay2 ??? overlay3 ???) Does this require scripting w/ tksurfer? Cameron
freesurfer@nmr.mgh.harvard.edu
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Cameron Ellis -
Doug Greve -
Kevin Teich