Hello All,

I ran recon-all on a subject and got the following error -------------------------------------------- talairach_avi done

cp transforms/talairach.auto.xfm transforms/talairach.xfm

#-------------------------------------------- #@# Talairach Failure Detection Thu Nov 19 16:17:54 EST 2009 /jet/subjects/MC/mri

talairach_afd -T 0.005 -xfm transforms/talairach.xfm

ERROR: talairach_afd: Talairach Transform: transforms/talairach.xfm ***FAILED*** (p=0.0000, pval=0.0000 < threshold=0.0050)

recon-all exited with ERRORS at Thu Nov 19 16:17:55 EST 2009 =======================END LOG FILE=======================

The brain is quite rotated from upright alignment, which is likely the problem. Any suggestions on how to do it or whether I should ?

Thanks

Ri