External Email - Use Caution
Hello, I'm Emmanuel from Mexico. I'm currently working with the pipeline of traculina, but during the first process (-prep) I found an error that says: "can't open orig/COR-.inf" and below that message there appears also: "ERROR: tkregister2_cmdl".
I figured out that infant freesurfer does not generate such a directory, as freesurfer does. I know that inside the 'orig' directory freesurfer locates a file called t1.mgz, or something like that. Do you know how I can solve this issue? I have already tried to create manually these files, but it did not work
------------------------------------------------------------------------------- I'm using the latest version of freesurfer, My O.S. is ubuntu 20.04
I'll appreciate your help, best regards
Hi Emmanuel - the infant version is under construction at the moment, which is why it is not documented on the website.
Best, Anastasia.
________________________________ From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Emmanuel Rodríguez Silva ers@ciencias.unam.mx Sent: Monday, June 6, 2022 12:28 PM To: freesurfer@nmr.mgh.harvard.edu freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] traculina errors in -prep process
External Email - Use Caution
Hello, I'm Emmanuel from Mexico. I'm currently working with the pipeline of traculina, but during the first process (-prep) I found an error that says: "can't open orig/COR-.inf" and below that message there appears also: "ERROR: tkregister2_cmdl".
I figured out that infant freesurfer does not generate such a directory, as freesurfer does. I know that inside the 'orig' directory freesurfer locates a file called t1.mgz, or something like that. Do you know how I can solve this issue? I have already tried to create manually these files, but it did not work
------------------------------------------------------------------------------- I'm using the latest version of freesurfer, My O.S. is ubuntu 20.04
I'll appreciate your help, best regards
-- Saludos cordiales Emmanuel Rodríguez Silva
Contacto: (044) 55 59 97 76 18
Licenciado en Manejo Sustentable de Zonas Costeras UNAM [https://secure-web.cisco.com/1rfZ-DDOiWW_3oOe_xbBgXNrhvtn8ZPUwedgV9xgx5RIWz3...]
freesurfer@nmr.mgh.harvard.edu