Hi Fatima,
I used the Martinos Center File drop ( https://www.nmr.mgh.harvard.edu/facility/filedrop/index.html https://www.nmr.mgh.harvard.edu/facility/filedrop/index.html).
Daniel
2011/9/14 Ahmed, F, Me fahmed@sun.ac.za fahmed@sun.ac.za
Hi Daniel,
How did you send your scans to Bruce?
Thanks,
Fatima
From: mailto:freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu [mailto: mailto:freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu]On Behalf Of Daniel Ferreira Padilla Sent: 14 September 2011 09:19 To: 'Khoa Nguyen' Cc: mailto:freesurfer@nmr.mgh.harvard.edu freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Recon-all Error: _FindFacePath
Hello Khoa,
Thank you very much for your suggestion. I checked both brainmask.mgz and wm.mgz and it saw ok for me. I have already sent my two scans to Bruce. Hope something can be done.
Cheers!
Daniel Ferreira
- Ocultar texto citado -
2011/9/13 Khoa Nguyen < mailto:khoa@nmr.mgh.harvard.edu khoa@nmr.mgh.harvard.edu>
Hi Daniel,
Usually when I get the FindFacePath error, the wm.mgz is very bad. You can try placing control points on the wm and rerun -autorecon2 and -autorecon3. That worked for me.
-Khoa
On Sat, 10 Sep 2011, Daniel Ferreira Padilla wrote:
Dear Bruce and experts,
I would really appreciate if you can help me with my scans.
I have successfully processed all my sample but got this same FindFacePath error with 2 subjects.
I checked the brainmask and wm files and for me they look ok. So I do not know how can I fix this error.
Thank you very much in advance
ERROR: _FindFacePath: could not find path! Linux neuroimagen 2.6.35-30-generic #54-Ubuntu SMP Tue Jun 7 18:41:54 UTC 2011 x86_64 GNU/Linux
recon-all -s GJ169_3D exited with ERRORS at Sat Aug 20 07:53:56 WEST 2011
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Thanks Daniel! That's great!
From: freesurfer-bounces@nmr.mgh.harvard.edu [mailto:freesurfer-bounces@nmr.mgh.harvard.edu] On Behalf Of Daniel Ferreira Padilla Sent: 14 September 2011 10:25 To: Ahmed, F, Me fahmed@sun.ac.za Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Recon-all Error: _FindFacePath
Hi Fatima,
I used the Martinos Center File drop (https://www.nmr.mgh.harvard.edu/facility/filedrop/index.html).
Daniel
2011/9/14 Ahmed, F, Me fahmed@sun.ac.za fahmed@sun.ac.za
Hi Daniel,
How did you send your scans to Bruce?
Thanks, Fatima
From: freesurfer-bounces@nmr.mgh.harvard.edumailto:freesurfer-bounces@nmr.mgh.harvard.edu [mailto:freesurfer-bounces@nmr.mgh.harvard.edumailto:freesurfer-bounces@nmr.mgh.harvard.edu]On Behalf Of Daniel Ferreira Padilla Sent: 14 September 2011 09:19 To: 'Khoa Nguyen' Cc: freesurfer@nmr.mgh.harvard.edumailto:freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Recon-all Error: _FindFacePath
Hello Khoa,
Thank you very much for your suggestion. I checked both brainmask.mgz and wm.mgz and it saw ok for me. I have already sent my two scans to Bruce. Hope something can be done.
Cheers!
Daniel Ferreira - Ocultar texto citado -
2011/9/13 Khoa Nguyen <khoa@nmr.mgh.harvard.edumailto:khoa@nmr.mgh.harvard.edu> Hi Daniel,
Usually when I get the FindFacePath error, the wm.mgz is very bad. You can try placing control points on the wm and rerun -autorecon2 and -autorecon3. That worked for me.
-Khoa
On Sat, 10 Sep 2011, Daniel Ferreira Padilla wrote: Dear Bruce and experts,
I would really appreciate if you can help me with my scans.
I have successfully processed all my sample but got this same FindFacePath error with 2 subjects.
I checked the brainmask and wm files and for me they look ok. So I do not know how can I fix this error.
Thank you very much in advance
ERROR: _FindFacePath: could not find path! Linux neuroimagen 2.6.35-30-generic #54-Ubuntu SMP Tue Jun 7 18:41:54 UTC 2011 x86_64 GNU/Linux
recon-all -s GJ169_3D exited with ERRORS at Sat Aug 20 07:53:56 WEST 2011
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
freesurfer@nmr.mgh.harvard.edu