Dear Doug,
I would need the mris_preproc patch, however the link provided (ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mris_preproc) is not working. Is there another way of getting the patch (rather than downloading the new version of FreeSurfer)?
Best wishes,
Nenad
***************
that link should work now
doug
On 02/07/2013 12:53 PM, Uri Hasson wrote:
Dear Doug,
We’re still using version 5.1 for a pipeline, and need to send
surface-based measures (volume, area, thickness) to a standard space
for whole-brain analysis. I read you had a patched version of
mris_preproc, but the link saw in an online post (below) doesn’t work.
Is there another link to the utility?
Thanks,
Uri
D.G wrote:
Hi Tetiana, thanks for the push. I’ve put a new version of mris_preproc
here:
ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mris_preproc
This will implement the fix.
To “install” make a backup of mris_preproc in $FREESURFER_HOME/bin, then
move the new version.
You should re-run recon-all with -qcache (no need to rerun all of
recon-all).
doug
you can get it from this page. You don't need the other files unless you are doing the interhemispheric analysis http://surfer.nmr.mgh.harvard.edu/fswiki/Xhemi
On 03/21/2014 04:41 AM, N. Medic wrote:
Dear Doug,
I would need the mris_preproc patch, however the link provided (ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mris_preproc) is not working. Is there another way of getting the patch (rather than downloading the new version of FreeSurfer)?
Best wishes,
Nenad
that link should work now
doug
On 02/07/2013 12:53 PM, Uri Hasson wrote:
Dear Doug, We’re still using version 5.1 for a pipeline, and need to send surface-based measures (volume, area, thickness) to a standard space for whole-brain analysis. I read you had a patched version of mris_preproc, but the link saw in an online post (below) doesn’t work. Is there another link to the utility? Thanks, Uri D.G wrote:
Hi Tetiana, thanks for the push. I’ve put a new version of mris_preproc here: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mris_preproc This will implement the fix. To “install” make a backup of mris_preproc in $FREESURFER_HOME/bin, then move the new version. You should re-run recon-all with -qcache (no need to rerun all of recon-all). doug
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