Chris,

I'm guessing you are using a version prior to v4.0.2, when a problem of this sort was fixed. To fix your installation (if prior to v4.0.2), you will need to edit recon-all, found in your $FREESURFER_HOME/bin. Search and replace this line:

if($UseAseg) set cmd = ($cmd -segmentation aseg.mgz);

with this:

if($UseAseg) set cmd = ($cmd -segmentation aseg.auto.mgz);

Nick

On Tue, 2008-01-15 at 16:03 -0600, bell0368@umn.edu wrote:

Freesurfers,

I have a subject that exits with errors from autorecon2 FILL with the following message "mri_fill: could not find any points where lh and rh wm are nbr s" Has anyone come across a similar problem? Thanks

Chris Bell _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer