Dear FreeSurfer expert,
I would like to use the new destrieux atlas for extracting anatomical data with the aparcstat2table command. Is that possible ? If yes can you give me the command ? Or give me some references that can help me ?
Thanks in advance Best regards
Lisa
Hi Lisa,
Have you tried using the --parc flag to specify the parcellation atlas you want?
Run aparcstats2table --help for more information.
Best
Emma
________________________________ From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Lisa Delalande delalande.lisa@gmail.com Sent: Thursday, January 25, 2018 12:48 PM To: Freesurfer support list Subject: [Freesurfer] aparcstat2table with new destrieux atlas
Dear FreeSurfer expert,
I would like to use the new destrieux atlas for extracting anatomical data with the aparcstat2table command. Is that possible ? If yes can you give me the command ? Or give me some references that can help me ?
Thanks in advance Best regards
Lisa
It should be possible. Just specify the annotation you want to use iwth the -p flag (run with -help to get more info)
On 1/25/18 12:48 PM, Lisa Delalande wrote:
Dear FreeSurfer expert,
I would like to use the new destrieux atlas for extracting anatomical data with the aparcstat2table command. Is that possible ? If yes can you give me the command ? Or give me some references that can help me ?
Thanks in advance Best regards
Lisa
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Boyd, Emma -
Douglas Greve -
Lisa Delalande