Hi Adam,

mcextreg files are generated by preproc-sess. If you don't have these files in your bold/015/ folder than preproc-sess might not have been completed.

Pratap

Hi all,

I'm having an issue with selxavg3-sess in Stable 4. I've run all commands up to this point without error. Here was the command I used

selxavg3-sess -s FB0011099AA -analysis fmcsm5_functionals

and the error:

ERROR: cannot find volume matching /autofs/cluster/roffman/users/folate_subjects/FB0011099AA/bold/015/mcextreg ERROR: loading nonpar reg /autofs/cluster/roffman/users/folate_subjects/FB0011099AA/bold/015/mcextreg

...

From looking at the other bold folders...it's clear that I'm missing the

"mcextreg" files in /cluster/roffman/users/folate_subjects/FB0011099AA/bold/015 which seems to halt the command

What is the best way to recover these files for this one BOLD folder?

Thanks,

Adam Nitenson

PS Here is the additional computer info:

FREESURFER_HOME: /usr/local/freesurfer/stable4

Build stamp: freesurfer-Linux-centos4-stable-v4.5.0-20100311

RedHat release: CentOS release 5.5 (Final)

Kernel info: Linux 2.6.18-194.8.1.el5 i686

NMR Center info (/space/freesurfer exists):

machine: seymour

SUBJECTS_DIR: /cluster/roffman/users/folate_subjects

PWD: /cluster/roffman/users/folate_subjects

ssh seymour setenv SUBJECTS_DIR /cluster/roffman/users/folate_subjects cd /cluster/roffman/users/folate_subjects

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