I have a researcher here who experienced a crash in Bert dataset, any hints? ---------- Forwarded message ---------- From: João Ricardo Sato jrsatobr@gmail.com Date: 2009/5/12 Subject: Re: Erro no FS To: Pedro Paulo de Magalhães Oliveira Junior ppaulojr@gmail.com
Pedro Paulo,
I had no idea why the application crashed in the bert dataset. Can you ask this in FreeSurfer List?
Joao Sato
2009/5/12 Pedro Paulo de Magalhães Oliveira Junior ppaulojr@gmail.com
Qual versao do FS?
Pedro Paulo de M. Oliveira Junior Diretor de Operações Netfilter & SpeedComm Telecom --- Novo Netfilter 3.0 www.netfilter.com.br
2009/5/12 João Ricardo Sato jrsatobr@gmail.com
PP,
vc sabe o q poderia ser esse erro? Aconteceu rodando o recon-all no bert.
0513: dt=0.000062, rms=0.428 (0.000%), neg=0, invalid=1511 0514: dt=0.000031, rms=0.428 (-0.000%), neg=0, invalid=1511 setting smoothness coefficient to 1.00 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.433, neg=0, invalid=1511 0515: dt=0.000000, rms=0.433 (0.000%), neg=0, invalid=1511 0516: dt=0.100000, rms=0.433 (-0.069%), neg=0, invalid=1511 blurSegmentation fault ERROR: mri_ca_register with non-zero status Linux andLinux 2.6.22.18-co-0.7.3 #1 PREEMPT Wed Apr 16 18:50:10 UTC 2008 i686 GNU/Linux
recon-all exited with ERRORS at Tue May 12 15:16:07 EDT 2009
Abs
Jsato
is it repeatable? On Tue, 12 May 2009, Pedro Paulo de Magalhães Oliveira Junior wrote:
I have a researcher here who experienced a crash in Bert dataset, any hints? ---------- Forwarded message ---------- From: João Ricardo Sato jrsatobr@gmail.com Date: 2009/5/12 Subject: Re: Erro no FS To: Pedro Paulo de Magalhães Oliveira Junior ppaulojr@gmail.com
Pedro Paulo,
I had no idea why the application crashed in the bert dataset. Can you ask this in FreeSurfer List?
Joao Sato
2009/5/12 Pedro Paulo de Magalhães Oliveira Junior ppaulojr@gmail.com
Qual versao do FS?
Pedro Paulo de M. Oliveira Junior Diretor de Operações Netfilter & SpeedComm Telecom --- Novo Netfilter 3.0 www.netfilter.com.br
2009/5/12 João Ricardo Sato jrsatobr@gmail.com
PP,
vc sabe o q poderia ser esse erro? Aconteceu rodando o recon-all no bert.
0513: dt=0.000062, rms=0.428 (0.000%), neg=0, invalid=1511 0514: dt=0.000031, rms=0.428 (-0.000%), neg=0, invalid=1511 setting smoothness coefficient to 1.00 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.433, neg=0, invalid=1511 0515: dt=0.000000, rms=0.433 (0.000%), neg=0, invalid=1511 0516: dt=0.100000, rms=0.433 (-0.069%), neg=0, invalid=1511 blurSegmentation fault ERROR: mri_ca_register with non-zero status Linux andLinux 2.6.22.18-co-0.7.3 #1 PREEMPT Wed Apr 16 18:50:10 UTC 2008 i686 GNU/Linux
recon-all exited with ERRORS at Tue May 12 15:16:07 EDT 2009
Abs
Jsato
Pedro Paulo,
How much memory does the system have? the mri_ca_register stage is pretty memory intensive. it needs at least 1GB just for itself.
Nick
On Tue, 2009-05-12 at 18:10 -0400, Bruce Fischl wrote:
is it repeatable? On Tue, 12 May 2009, Pedro Paulo de Magalhães Oliveira Junior wrote:
I have a researcher here who experienced a crash in Bert dataset, any hints? ---------- Forwarded message ---------- From: João Ricardo Sato jrsatobr@gmail.com Date: 2009/5/12 Subject: Re: Erro no FS To: Pedro Paulo de Magalhães Oliveira Junior ppaulojr@gmail.com
Pedro Paulo,
I had no idea why the application crashed in the bert dataset. Can you ask this in FreeSurfer List?
Joao Sato
2009/5/12 Pedro Paulo de Magalhães Oliveira Junior ppaulojr@gmail.com
Qual versao do FS?
Pedro Paulo de M. Oliveira Junior Diretor de Operações Netfilter & SpeedComm Telecom --- Novo Netfilter 3.0 www.netfilter.com.br
2009/5/12 João Ricardo Sato jrsatobr@gmail.com
PP,
vc sabe o q poderia ser esse erro? Aconteceu rodando o recon-all no bert.
0513: dt=0.000062, rms=0.428 (0.000%), neg=0, invalid=1511 0514: dt=0.000031, rms=0.428 (-0.000%), neg=0, invalid=1511 setting smoothness coefficient to 1.00 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.433, neg=0, invalid=1511 0515: dt=0.000000, rms=0.433 (0.000%), neg=0, invalid=1511 0516: dt=0.100000, rms=0.433 (-0.069%), neg=0, invalid=1511 blurSegmentation fault ERROR: mri_ca_register with non-zero status Linux andLinux 2.6.22.18-co-0.7.3 #1 PREEMPT Wed Apr 16 18:50:10 UTC 2008 i686 GNU/Linux
recon-all exited with ERRORS at Tue May 12 15:16:07 EDT 2009
Abs
Jsato
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