You will also need

https://gate.nmr.mgh.harvard.edu/safelinks/greve/register-sess https://gate.nmr.mgh.harvard.edu/safelinks/greve/mkbrainmask-sess

On 10/11/2019 11:12 AM, Douglas N. Greve wrote: This is a bug. I think I have fixed it. Can you download these files

https://gate.nmr.mgh.harvard.edu/safelinks/greve/preproc-sess https://gate.nmr.mgh.harvard.edu/safelinks/greve/rawfunc2surf-sess https://gate.nmr.mgh.harvard.edu/safelinks/greve/rawfunc2tal-sess

Copy them to $FREESURFER_HOME/fsfast/bin (after making backups of the ones that are there)

Let me know if this works. Also, I would be careful with changing the DOF -- usually it is never needed.

On 10/8/2019 5:12 PM, Droppa, Kyle Salmon wrote: Good evening,

I am using freesurfer version 6 and I am having an issue with changing the degrees of freedom when I run preproc-sess. I ade some registrations that are 9 and 12 dof instead of the default 6, however when I try to run preproc-sess, it pulls the dof6 files instead.

Is there a flag I can use that pulls the register.dof9.lta and register.dof12.lta files instead?

Thank you and have a nice night!

___________________ Kyle Salmon Droppa, B.A. Clinical Research Coordinator Athinoula A. Martinos Center for Biomedical Imaging Magnetic Resonance - Physics & Instrumentation Group

https://www.martinos.org/lab/mr-pig https://www.massgeneral.org/nicc

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