Hi
For purposes of de-identification, is there an easy way to "rename" all the contents of data for a processed subject?
For example, If I want to do share data or do reliability training on an existing subject (e.g., "ABC1234"), I want to rename everything associated with this case to "Case1".
Thanks Wil
____________________________________ William Irwin | Imaging Core Supervisor UCSF | Memory and Aging Center 350 Parnassus Avenue, Suite 905 San Francisco CA 94143-1207 wirwin@memory.ucsf.edu | memory.ucsf.edu p: 415.476.1680 | f: 415.476.1816
You can just rename the directory ABC1234 to Case1
*mv ABC1234 Case1*
On Thu, Sep 1, 2011 at 12:01, Irwin, William WIrwin@memory.ucsf.edu wrote:
Hi****
For purposes of de-identification, is there an easy way to “rename” all the contents of data for a processed subject?****
For example, If I want to do share data or do reliability training on an existing subject (e.g., “ABC1234”), I want to rename everything associated with this case to “Case1”.****
Thanks****
Wil****
William Irwin | Imaging Core Supervisor UCSF | Memory and Aging Center 350 Parnassus Avenue, Suite 905 San Francisco CA 94143-1207 wirwin@memory.ucsf.edu | memory.ucsf.edu p: 415.476.1680 | f: 415.476.1816****
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That is not going to change the information in associated files, for example stats files.
-Wil
From: Pedro Paulo de Magalhães Oliveira Junior [mailto:ppj@netfilter.com.br] Sent: Thursday, September 01, 2011 8:09 AM To: Irwin, William Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Renaming a processed subject
You can just rename the directory ABC1234 to Case1
mv ABC1234 Case1
On Thu, Sep 1, 2011 at 12:01, Irwin, William <WIrwin@memory.ucsf.edumailto:WIrwin@memory.ucsf.edu> wrote: Hi
For purposes of de-identification, is there an easy way to "rename" all the contents of data for a processed subject?
For example, If I want to do share data or do reliability training on an existing subject (e.g., "ABC1234"), I want to rename everything associated with this case to "Case1".
Thanks Wil
____________________________________ William Irwin | Imaging Core Supervisor UCSF | Memory and Aging Center 350 Parnassus Avenue, Suite 905 San Francisco CA 94143-1207 wirwin@memory.ucsf.edumailto:wirwin@memory.ucsf.edu | memory.ucsf.eduhttp://memory.ucsf.edu p: 415.476.1680tel:415.476.1680 | f: 415.476.1816tel:415.476.1816
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The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
I think the .mgh/.mgz files and surfaces contain some cmdline info in them, so it may not be so trivial. Reading and writing them in matlab will probably remove all that stuff.
cheers Bruce
On Thu, 1 Sep 2011, Irwin, William wrote:
Hi
For purposes of de-identification, is there an easy way to ?rename? all the contents of data for a processed subject?
For example, If I want to do share data or do reliability training on an existing subject (e.g., ?ABC1234?), I want to rename everything associated with this case to ?Case1?.
Thanks
Wil
William Irwin | Imaging Core Supervisor UCSF | Memory and Aging Center 350 Parnassus Avenue, Suite 905 San Francisco CA 94143-1207 wirwin@memory.ucsf.edu | memory.ucsf.edu p: 415.476.1680 | f: 415.476.1816
Hi Bruce-
Not trivial to be sure!
I was hoping there was an undocumented feature/command.
Of course, everyone and their neighbor could suggest a "useful feature to be added", but this one seems particularly useful.
Thanks, Wil
|-----Original Message----- |From: Bruce Fischl [mailto:fischl@nmr.mgh.harvard.edu] |Sent: Thursday, September 01, 2011 8:58 AM |To: Irwin, William |Cc: freesurfer@nmr.mgh.harvard.edu |Subject: Re: [Freesurfer] Renaming a processed subject | |I think the .mgh/.mgz files and surfaces contain some cmdline info in them, so |it may not be so trivial. Reading and writing them in matlab will probably |remove all that stuff. | |cheers |Bruce | | |On Thu, 1 Sep 2011, Irwin, William wrote: | |> |> Hi |> |> |> |> For purposes of de-identification, is there an easy way to ?rename? |> all the contents of data for a processed subject? |> |> |> |> For example, If I want to do share data or do reliability training on |> an existing subject (e.g., ?ABC1234?), I want to rename everything |> associated with this case to ?Case1?. |> |> |> |> Thanks |> |> Wil |> |> |> |> ____________________________________ |> William Irwin | Imaging Core Supervisor UCSF | Memory and Aging Center |> 350 Parnassus Avenue, Suite 905 |> San Francisco CA 94143-1207 |> wirwin@memory.ucsf.edu | memory.ucsf.edu |> p: 415.476.1680 | f: 415.476.1816 |> |> |> |> |> |> |> | | |The information in this e-mail is intended only for the person to whom it is |addressed. If you believe this e-mail was sent to you in error and the e-mail |contains patient information, please contact the Partners Compliance |HelpLine at http://www.partners.org/complianceline . If the e-mail was sent |to you in error but does not contain patient information, please contact the |sender and properly dispose of the e-mail.
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