Hi fellow Surfers,
in 3.0.5 (Linux centos4_x86_64) I used to be able to the following from a subdirectory myscripts-anat in the subjects directory:
tksurfer subjects_name lh inflated -overlay lh.sulc
Now, on macosx 4.3.0 this does not work anymore. I get: ERROR: cannot find lh.sulc
using: tksurfer subjects_name lh inflated -overlay ../surf/lh.sulc does work. Now, is this a difference related to the switch linux to macosx or to the switch 3.0.5 to 4.3.0? And more importantly do you consider this something you will fix, or is this something I will have to change in all my scripts? Please let me know...
ahoi Sebastian
freesurfer@nmr.mgh.harvard.edu