I've read in the mailing list archives people have had issues with tkmedit and free view displaying control points differently. For me the first brain I've loaded up has a single control point in free view that does not show in tkmedit. Others have complained of free view showing points seemingly at random? Is this a user related issue perhaps?
Here are the contents of the control.dat file in question
55.000000 -60.000000 -41.000000 54.000000 -61.000000 -41.000000 53.000000 -62.000000 -41.000000 52.000000 -59.000000 -37.000000 52.000000 -63.000000 -40.000000 2.000000 48.000000 14.000000 2.000000 47.000000 13.000000 1.000000 46.000000 11.000000 1.000000 41.000000 8.000000 1.000000 40.000000 6.000000 0.000000 45.000000 10.000000 0.000000 44.000000 10.000000 0.000000 43.000000 10.000000 0.000000 39.000000 6.000000 0.000000 38.000000 6.000000 0.000000 37.000000 7.000000 -1.000000 42.000000 10.000000 info numpoints 17 useRealRAS 0
the errant control point is on slice 128 best viewed coronally.
jon
Would it be possible to send us the volume and control point files?
Thanks, Ruopeng
On 09/25/2013 02:09 PM, Jonathan Holt wrote:
I've read in the mailing list archives people have had issues with tkmedit and free view displaying control points differently. For me the first brain I've loaded up has a single control point in free view that does not show in tkmedit. Others have complained of free view showing points seemingly at random? Is this a user related issue perhaps?
Here are the contents of the control.dat file in question
55.000000 -60.000000 -41.000000 54.000000 -61.000000 -41.000000 53.000000 -62.000000 -41.000000 52.000000 -59.000000 -37.000000 52.000000 -63.000000 -40.000000 2.000000 48.000000 14.000000 2.000000 47.000000 13.000000 1.000000 46.000000 11.000000 1.000000 41.000000 8.000000 1.000000 40.000000 6.000000 0.000000 45.000000 10.000000 0.000000 44.000000 10.000000 0.000000 43.000000 10.000000 0.000000 39.000000 6.000000 0.000000 38.000000 6.000000 0.000000 37.000000 7.000000 -1.000000 42.000000 10.000000 info numpoints 17 useRealRAS 0
the errant control point is on slice 128 best viewed coronally.
jon _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Yep, I'll upload to the ftp server. On Sep 25, 2013, at 2:28 PM, Ruopeng Wang rpwang@nmr.mgh.harvard.edu wrote:
Would it be possible to send us the volume and control point files?
Thanks, Ruopeng
On 09/25/2013 02:09 PM, Jonathan Holt wrote:
I've read in the mailing list archives people have had issues with tkmedit and free view displaying control points differently. For me the first brain I've loaded up has a single control point in free view that does not show in tkmedit. Others have complained of free view showing points seemingly at random? Is this a user related issue perhaps?
Here are the contents of the control.dat file in question
55.000000 -60.000000 -41.000000 54.000000 -61.000000 -41.000000 53.000000 -62.000000 -41.000000 52.000000 -59.000000 -37.000000 52.000000 -63.000000 -40.000000 2.000000 48.000000 14.000000 2.000000 47.000000 13.000000 1.000000 46.000000 11.000000 1.000000 41.000000 8.000000 1.000000 40.000000 6.000000 0.000000 45.000000 10.000000 0.000000 44.000000 10.000000 0.000000 43.000000 10.000000 0.000000 39.000000 6.000000 0.000000 38.000000 6.000000 0.000000 37.000000 7.000000 -1.000000 42.000000 10.000000 info numpoints 17 useRealRAS 0
the errant control point is on slice 128 best viewed coronally.
jon _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Uploaded look for CPsDon'tMatch. It's the subject directory so surfaces, volumes, tmp folder with control.dat
jon On Sep 25, 2013, at 2:34 PM, Jonathan Holt whatsdac@umich.edu wrote:
Yep, I'll upload to the ftp server. On Sep 25, 2013, at 2:28 PM, Ruopeng Wang rpwang@nmr.mgh.harvard.edu wrote:
Would it be possible to send us the volume and control point files?
Thanks, Ruopeng
On 09/25/2013 02:09 PM, Jonathan Holt wrote:
I've read in the mailing list archives people have had issues with tkmedit and free view displaying control points differently. For me the first brain I've loaded up has a single control point in free view that does not show in tkmedit. Others have complained of free view showing points seemingly at random? Is this a user related issue perhaps?
Here are the contents of the control.dat file in question
55.000000 -60.000000 -41.000000 54.000000 -61.000000 -41.000000 53.000000 -62.000000 -41.000000 52.000000 -59.000000 -37.000000 52.000000 -63.000000 -40.000000 2.000000 48.000000 14.000000 2.000000 47.000000 13.000000 1.000000 46.000000 11.000000 1.000000 41.000000 8.000000 1.000000 40.000000 6.000000 0.000000 45.000000 10.000000 0.000000 44.000000 10.000000 0.000000 43.000000 10.000000 0.000000 39.000000 6.000000 0.000000 38.000000 6.000000 0.000000 37.000000 7.000000 -1.000000 42.000000 10.000000 info numpoints 17 useRealRAS 0
the errant control point is on slice 128 best viewed coronally.
jon _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
freesurfer@nmr.mgh.harvard.edu
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Jonathan Holt -
Ruopeng Wang