Hi Sadhana, this has been answered several times. Are you not getting the replies from the list?

On 12/16/16 6:13 PM, Sadhana Singh wrote:

Hello FreeSurfer Developers,

I'm running the recon-all on my subjects data as described in freesurfer tutorial (https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial), but it shows the following error when I run the recon-all command:

ERROR: cannot find CON_101.nii recon-all -s exited with ERRORS

I've tried so many times but still shows same errors. Does anyone have any thoughts on how to trouble-shoot this one? Also, Ive attached the recon-all.log in case it's of any use.

1. FreeSurfer version: freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0
2. Platform: Red Hat Enterprise Linux 7
3. uname -a: Linux lcmodel 3.10.0-327.el7.x86_64 #1 SMP Thu Oct 29 17:29:29 EDT 2015 x86_64 x86_64 x86_64 GNU/Linux
4. recon-all.log: see attached

Regards /Sadhana Singh, PhD / /Postdoctoral Researcher / // /Departments of Anesthesiology / // /David Geffen School of Medicine at UCLA / //// /University of California at Los Angeles / // /Los Angeles, CA, USA/ // /Phone No: 424-270-4940 / // /Email: sadhanasingh@mednet.ucla.edu mailto:sadhanasingh@mednet.ucla.edu /

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