Hi Saurabh, That information is automatically calculated for you by FreeSurfer. You can find more information about it here: https://surfer.nmr.mgh.harvard.edu/fswiki/MorphometryStats

Allison

On Wed, 26 Feb 2014, Saurabh Thakur wrote:

Hi Freesurfer expert,

I am looking for just volumetric quantity of GM,WM,CSF.

Can u suggest some commands tat i used or explore so that i get volumetric data.

Presently value for subject Bert i m getting:

Right now i m working on  mri_segstats ---->giving me vol of white matter by using wmparc.stats Total cortical white matter volume, 484479.305031, mm^3

mri_segstats-----> giving me vol of grey matter by using aseg.stats Total gray matter volume, 655593.521190, mm^3

If i wanted to have all the value in one single window/file.

cheers Saurabh Thakur

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