not sure. Try running mri_sclimbic_seg --i GP0050/mri/orig.mgz --o junk.mgz

On 8/4/2022 4:20 PM, Zeng, Victor (BIDMC - Keshavan - Psychiatry) wrote:

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Hi all,

I am receiving this error when trying to run sclimbic module. It's not being very descriptive about what the error is so I was wondering if you all can help debug. My SUBJECTS_DIR is correct

mri_sclimbic_seg --s GP0050 /usr/local/freesurfer/dev7/python/scripts/mri_sclimbic_seg --s GP0050 Excluding seg [853] Using CPU Using 1 thread(s) Loaded lookup table /usr/local/freesurfer/dev7/models/sclimbic.ctab Loaded population stats /usr/local/freesurfer/dev7/models/sclimbic.volstats.csv nb_labels 14 Segmentation fault

i am using freesurfer-linux-centos7_x86_64-dev-20220802-56c77e1

Victor Zeng Beth Israel Deaconess Medical Center Keshavan Lab --

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