Make_average_subject error

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fMRI stats on the surface

Furlong, Carolyn

9 May 2007 9 May '07

6:15 a.m.

Hi all,

I tried running it again with --no-symlink but this error came up

ERROR: Flag --no-symlink unrecognized.

any advice?

Best wishes Carolyn

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Anthony Steven Dick

9 May 9 May

9:14 a.m.

I have been able to run it with --no-symlink (the flag has to go last), but I get errors like this:

mris_make_average_surface: could not read surface file /Volumes/data/NL-GCS/subjects/freesurfer_3.0.1/GCS_adults/--no-symlink/surf/rh.sphere.reg

Thanks.

Anthony

Furlong, Carolyn wrote:

...

Hi all,

I tried running it again with --no-symlink but this error came up

ERROR: Flag --no-symlink unrecognized.

any advice?

Best wishes Carolyn

Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

-- Anthony Steven Dick, Ph.D. Post-Doctoral Scholar Human Neuroscience Laboratory Department of Neurology The University of Chicago 5841 S. Maryland Ave. MC-2030 Chicago, IL 60637 Phone: (773)-834-7770 Email: adick@uchicago.edu Web: http://home.uchicago.edu/~adick/

Doug Greve

1:21 p.m.

you may be using a version that does not have this option. Try using these

doug

ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/make_average_subject ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/make_average_surface

Furlong, Carolyn wrote:

...

Hi all,

I tried running it again with --no-symlink but this error came up

ERROR: Flag --no-symlink unrecognized.

any advice?

Best wishes Carolyn

Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

-- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 In order to help us help you, please follow the steps in: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting

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Anthony Steven Dick
Doug Greve
Furlong, Carolyn