Hi,
I am having trouble removing the pons with recon-all -stage1 -pons-xyz. I've tried five pons coords, unsuccessfully. When you move the mouse location in the sagittal, horizontal, and coronal images, the slice numbers change. When I get the talairach coords for the pons, should the slice numbers be the same or can they be different?
Thanks. Nam.
freesurfer@nmr.mgh.harvard.edu