External Email - Use Caution
Dear Freesurfer experts,
we are trying to use your function "mris_ca_label" in order to get an annotation file in the subject's space using the Schaefer-Yeo atlas.
However, we noticed that a "special classifier array" is required among the inputs.
Could you pleas give us more information about the type of file required and where we can find it?
Thank you and best regards,
Valentina Mancini
Hi Valentina
you need to create it with mris_ca_train. I think Thomas usually just uses mri_surf2surf to map across subjects, but perhaps he can comment.
cheers Bruce
On Fri, 19 Jul 2019, Valentina Mancini wrote:
External Email - Use Caution
Dear Freesurfer experts,
we are trying to use your function "mris_ca_label" in order to get an annotation file in the subject's space using the Schaefer-Yeo atlas.
However, we noticed that a "special classifier array" is required among the inputs.
Could you pleas give us more information about the type of file required and where we can find it?
Thank you and best regards,
Valentina Mancini
External Email - Use Caution
Many thanks for your prompt answer!
________________________________ Da: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu per conto di Bruce Fischl fischl@nmr.mgh.harvard.edu Inviato: venerdì 19 luglio 2019 16:11:25 A: Freesurfer support list Cc: Martin Seeber; Thomas Yeo; Yeo, Boon Thye Thomas -- Boon Thye Thomas Yeo Oggetto: Re: [Freesurfer] mais_ca_label
Hi Valentina
you need to create it with mris_ca_train. I think Thomas usually just uses mri_surf2surf to map across subjects, but perhaps he can comment.
cheers Bruce
On Fri, 19 Jul 2019, Valentina Mancini wrote:
External Email - Use CautionDear Freesurfer experts,
we are trying to use your function "mris_ca_label" in order to get an annotation file in the subject's space using the Schaefer-Yeo atlas.
However, we noticed that a "special classifier array" is required among the inputs.
Could you pleas give us more information about the type of file required and where we can find it?
Thank you and best regards,
Valentina Mancini
External Email - Use Caution
Hi Valentina,
We will send you the files. They will also be incorporated into FreeSurfer at some point.
Thanks, Thomas
On Fri, Jul 19, 2019 at 10:11 PM Bruce Fischl fischl@nmr.mgh.harvard.edu wrote:
Hi Valentina
you need to create it with mris_ca_train. I think Thomas usually just uses mri_surf2surf to map across subjects, but perhaps he can comment.
cheers Bruce
On Fri, 19 Jul 2019, Valentina Mancini wrote:
External Email - Use CautionDear Freesurfer experts,
we are trying to use your function "mris_ca_label" in order to get an annotation file in the subject's space using the Schaefer-Yeo atlas.
However, we noticed that a "special classifier array" is required among the inputs.
Could you pleas give us more information about the type of file required
and
where we can find it?
Thank you and best regards,
Valentina Mancini
freesurfer@nmr.mgh.harvard.edu
-
Bruce Fischl -
Thomas Yeo -
Valentina Mancini