One possible solution is adding ../freesurfer/matlab to your matlab's set path.

Regards

Woo-Suk Tae Seoul, Korea

---------------------------------------------------------------------------------------- Woo-Suk, Tae Ph.D. Research Professor Brain Convergence Research Center, Medical Research Center Anam Hospital, Korea University Medical Center, Seoul, Korea mobile: 82-10-9120-4629 office: 82-2-920-6831 email: woosuk.tae@gmail.com, woostae@gmail.com woostae@naver.com ----------------------------------------------------------------------------------------

On Sun, Mar 6, 2016 at 12:02 AM, Bruce Fischl fischl@nmr.mgh.harvard.edu wrote:

can you send us the recon-all.log file?

cheers Bruce On Sat, 5 Mar 2016, Ankita Chatterjee wrote:

...

Hello FS experts,I am a bit stuck and was hoping for some advice!

I am using Matlab Student version for my research and was trying to determine local gyrification index on some samples that I have processed

via

...

the recon-all -all step.

When I run recon-all -lgi on my subject, it starts up, is able to access MATLAB, but then gives an error >> Undefined function or variable 'make_outer_surface'. Am I missing a package from the MATLAB student version? How do I solve this? Any help will be greatly appreciated!!!

Ankita

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