Dear All, Is there any way I can get the Desikan-Killiany cortical and subcortical labels on MNI152 template. I know I can get a rough estimate using the linear transformation matrix "mni152.register.dat". I also find that the subject cvs_avg35 is non-linearly registered to MNI152 and given in the cvs_avg35_inMNI152 directory. But non of them are accurate enough for my purpose. I tried hopelessly to run the FreeSurfer on the MNI152 template itself and it failed. Any other suggestion is greatly appreciated.
Best
I ran the MNI152 average through recon-all and it seemed to do ok. You can get it from here ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mni152.tar.gz
I don't know what kind of accuracy you are looking for, but for cortex, you should work strictly in the surface and avoid volume-based atlases like the 152.
doug
On 09/24/2014 01:46 PM, Ray Razlighi wrote:
Dear All, Is there any way I can get the Desikan-Killiany cortical and subcortical labels on MNI152 template. I know I can get a rough estimate using the linear transformation matrix "mni152.register.dat". I also find that the subject cvs_avg35 is non-linearly registered to MNI152 and given in the cvs_avg35_inMNI152 directory. But non of them are accurate enough for my purpose. I tried hopelessly to run the FreeSurfer on the MNI152 template itself and it failed. Any other suggestion is greatly appreciated.
Best
freesurfer@nmr.mgh.harvard.edu
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Douglas N Greve -
Ray Razlighi