Hello,
I am having trouble running motion correction on a set of block design data. When the matlab script is run, I get an error saying:
"ERROR: ntrs = 2 < 6"
I am not sure what this error means, except that ntrs, comes from the fmc.mcdat file. Could anyone explain to me what this error message means, why there has to me more values in the fmc.mcdat file?
Here is my fmc.mcdat:
0 0.0000 -0.0000 0.0000 -0.0000 -0.0000 -0.0000 0 0 0.000 1 0.0031 -0.0102 -0.0081 0.0577 -0.0003 0.0620 44.93 44.74 0.085
Thank you,
gtobon
Look in that run to see how many TRs are in that run (mri_info f.nii). It is possible that you unpacked an aborted run (or a run of some other type)?
doug
Gabriel A. Tobon wrote:
Hello,
I am having trouble running motion correction on a set of block design data. When the matlab script is run, I get an error saying:
"ERROR: ntrs = 2 < 6"I am not sure what this error means, except that ntrs, comes from the fmc.mcdat file. Could anyone explain to me what this error message means, why there has to me more values in the fmc.mcdat file?
Here is my fmc.mcdat:
0 0.0000 -0.0000 0.0000 -0.0000 -0.0000 -0.0000 0 0 0.000 1 0.0031 -0.0102 -0.0081 0.0577 -0.0003 0.0620 44.93 44.74 0.085
Thank you,
gtobon
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Thank you Doug, you were correct. I was using a faulty run.
Gabriel
On Wed, Feb 17, 2010 at 3:04 PM, Douglas N Greve greve@nmr.mgh.harvard.eduwrote:
Look in that run to see how many TRs are in that run (mri_info f.nii). It is possible that you unpacked an aborted run (or a run of some other type)?
doug
Gabriel A. Tobon wrote:
Hello,
I am having trouble running motion correction on a set of block design data. When the matlab script is run, I get an error saying:
"ERROR: ntrs = 2 < 6"
I am not sure what this error means, except that ntrs, comes from the fmc.mcdat file. Could anyone explain to me what this error message means, why there has to me more values in the fmc.mcdat file?
Here is my fmc.mcdat:
0 0.0000 -0.0000 0.0000 -0.0000 -0.0000 -0.0000 0 0 0.000 1 0.0031 -0.0102 -0.0081 0.0577 -0.0003 0.0620 44.93 44.74 0.085
Thank you,
gtobon
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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