Hi Freesurfer experts, I am checking quality of recon of some new scan and I need some advice about the needed edits. I attached two snapshots showing the problems: 1. a problem with white matter recon (surface seems good, but volume not) 2. a problem in the right medial subcortical wall (a lot of confusion in sufaces).
My questions are whether I have to discard this subjects or try to edit and which type of edits do you suggest
Thank you!
Angela
Hi Angela
the images look reasonable - why would you have to discard it?
cheers Bruce On Tue, 8 Dec 2015, angela.favaro@unipd.it wrote:
Hi Freesurfer experts, I am checking quality of recon of some new scan and I need some advice about the needed edits. I attached two snapshots showing the problems: 1. a problem with white matter recon (surface seems good, but volume not) 2. a problem in the right medial subcortical wall (a lot of confusion in sufaces).
My questions are whether I have to discard this subjects or try to edit and which type of edits do you suggest
Thank you!
Angela
Hi Bruce thank you for reassuring me when pial surface seems a ball of yarn I feel anxious....
Angela
Hi Angela
the images look reasonable - why would you have to discard it?
cheers Bruce On Tue, 8 Dec 2015, angela.favaro@unipd.it wrote:
Hi Freesurfer experts, I am checking quality of recon of some new scan and I need some advice about the needed edits. I attached two snapshots showing the problems:
a problem with white matter recon (surface seems good, but volume not) 2. a problem in the right medial subcortical wall (a lot of confusion in sufaces).
My questions are whether I have to discard this subjects or try to edit and which type of edits do you suggest
Thank you!
Angela
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I think it was in hippocampus, no? The surfaces are essentially undefined there and you can ignore them. Otherwise they looked reasonable, at least as far as I can tell form a single slice
On Tue, 8 Dec 2015, angela.favaro@unipd.it wrote:
Hi Bruce thank you for reassuring me when pial surface seems a ball of yarn I feel anxious....
Angela
Hi Angela
the images look reasonable - why would you have to discard it?
cheers Bruce On Tue, 8 Dec 2015, angela.favaro@unipd.it wrote:
Hi Freesurfer experts, I am checking quality of recon of some new scan and I need some advice about the needed edits. I attached two snapshots showing the problems:
a problem with white matter recon (surface seems good, but volume not) 2. a problem in the right medial subcortical wall (a lot of confusion in sufaces).
My questions are whether I have to discard this subjects or try to edit and which type of edits do you suggest
Thank you!
Angela
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu
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angela.favaro＠unipd.it -
Bruce Fischl