Hi FS experts and users After completing the mri_glmfit-sim, I get some cluster in the *.cluster.summary. I want to threshold some clusters whose vertex number are smaller than specific number such as 150. How can I do that? Thanks All the best Rujing Zha
2014-04-14
charujing123
By the way, I just want to see clusters whose numbers of vertex is over thresholded norm in the sig.mgh while using freeview. Thanks All the best Rujing Zha
2014-04-14
charujing123
发件人："charujing123"charujing123@163.com 发送时间：2014-04-14 10:41 主题：[Freesurfer] control numbers of cluster based on vertex numbers in each cluster 收件人："freesurfer@nmr.mgh.harvard.edu"freesurfer@nmr.mgh.harvard.edu 抄送：
Hi FS experts and users After completing the mri_glmfit-sim, I get some cluster in the *.cluster.summary. I want to threshold some clusters whose vertex number are smaller than specific number such as 150. How can I do that? Thanks All the best Rujing Zha
2014-04-14
charujing123
Look in the summary file and find out the clusterwise p-value associated with 150 vertices, then re-run mri_glmfit-sim setting the cwp to this threshold doug
On 04/13/2014 10:41 PM, charujing123 wrote:
Hi FS experts and users After completing the mri_glmfit-sim, I get some cluster in the *.cluster.summary. I want to threshold some clusters whose vertex number are smaller than specific number such as 150. How can I do that? Thanks All the best Rujing Zha 2014-04-14
charujing123
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Thanks doug; All the best. Rujing Zha
2014-04-15
charujing123
发件人：Douglas N Greve greve@nmr.mgh.harvard.edu 发送时间：2014-04-15 02:16 主题：Re: [Freesurfer] control numbers of cluster based on vertex numbers in each cluster 收件人："freesurfer"freesurfer@nmr.mgh.harvard.edu 抄送：
Look in the summary file and find out the clusterwise p-value associated with 150 vertices, then re-run mri_glmfit-sim setting the cwp to this threshold doug
On 04/13/2014 10:41 PM, charujing123 wrote:
Hi FS experts and users After completing the mri_glmfit-sim, I get some cluster in the *.cluster.summary. I want to threshold some clusters whose vertex number are smaller than specific number such as 150. How can I do that? Thanks All the best Rujing Zha 2014-04-14
charujing123
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