It would be very helpful for me.

On Fri, 18 Jul 2014 09:18:15 -0400 (EDT) Bruce Fischl fischl@nmr.mgh.harvard.edu wrote:

Hi pfannmoe

this is a bug in mri_label2label that we fixed a while ago. Zeke: can post a new version and let people on the list know where it is?

thanks Bruce

On Fri, 18 Jul 2014, pfannmoelj@uni-greifswald.de wrote:

...

Dear Experts,

I am working with freesurfer 5.3 on Mac OSX. I applied recon-all to a data set. This has been done with the same data on a Linux system with Freesurfer 5.3 without any problems. Everything works fine on the Mac except of the labelling of Brodmann Areas. On the Mac the regions are not created as a single areal with a border at the outline. Instead they consist of an outside border and several small regions inside the label.

I already tried to create the Brodmann Areas by myself using the command:

mri_label2label --srclabel /.../subjects/fsaverage/label/lh.BA3b.label --srcsubject fsaverage --trglabel lh.BA3b.test.label --trgsubject subjid --regmethod surface --hemi lh

This does not change the result. I attached a screen shot of the label in fsaverage and one of my subjects. Any help is highly appreciated.

Regards pfannmoe

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