Hi all, We've just installed Freesurfer and tried to use mri_convert and encountered some problems. In the csurf GUI, I tried to convert a subject's image, which we keep in analyze (.img, .hdr) format, and I got the message: "Convert (subj186) failed - working on: orig/001/subj186.img" I then loaded the flat files (I.001, I.002 ... etc.) into the directory and tried to convert these. The program hangs indefinitely once I press the convert button. Next I tried to run it thought the command line on the flat files and got a message saying "No valid license key!". To the best of our knowledge, all the license files are where they should be. Any ideas on what's happening? Thanks, Alex
Hi Alex,
For the license problem, make sure that there is an environment variable called FREESURFER_HOME. Then make sure that $FREESURFER_HOME/.license exists and has something in it.
If you get past the license problem and mri_convert still does not work, send us the command-line and the screen output.
doug
On Wed, 20 Apr 2005, Fornito, Alexander wrote:
Hi all, We've just installed Freesurfer and tried to use mri_convert and encountered some problems. In the csurf GUI, I tried to convert a subject's image, which we keep in analyze (.img, .hdr) format, and I got the message: "Convert (subj186) failed - working on: orig/001/subj186.img" I then loaded the flat files (I.001, I.002 ... etc.) into the directory and tried to convert these. The program hangs indefinitely once I press the convert button. Next I tried to run it thought the command line on the flat files and got a message saying "No valid license key!". To the best of our knowledge, all the license files are where they should be. Any ideas on what's happening? Thanks, Alex
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