Some months ago it was asked in this list how to make a Movie of he process of the inflation of the brain.
Some hints:
Create this tcl script and name it as script.tcl:
for {set x 0} {$x<120} {incr x} { set r [expr (round(1.2*$x + 3))] shrink $r redraw save_tiff ${x}-img.tif } exit
Then use the commands: tksurfer bert lh pial -annotation aparc.annot -tcl script.tcl ffmpeg -r 15 -b 2500 -sameq -i %d-img.tif videoOutput.mp4
You can check the results at: http://www.youtube.com/watch?v=aj-d8PZMXt8
or you can save snapshots from mris_inflate with
mris_inflate -w 1 -scale 1 ...
then render each of the resulting surfaces. cheers, Bruce
On Thu, 28 Apr 2011, Pedro Paulo de Magalhães Oliveira Junior wrote:
Some months ago it was asked in this list how to make a Movie of he process of the inflation of the brain.
Some hints:
Create this tcl script and name it as script.tcl:
for {set x 0} {$x<120} {incr x} { set r [expr (round(1.2*$x + 3))] shrink $r redraw save_tiff ${x}-img.tif } exit
Then use the commands: tksurfer bert lh pial -annotation aparc.annot -tcl script.tcl ffmpeg -r 15 -b 2500 -sameq -i %d-img.tif videoOutput.mp4
You can check the results at: http://www.youtube.com/watch?v=aj-d8PZMXt8
easier.
Can you inflate until you get the sphere?
2011/4/28 Bruce Fischl fischl@nmr.mgh.harvard.edu
or you can save snapshots from mris_inflate with
mris_inflate -w 1 -scale 1 ...
then render each of the resulting surfaces. cheers, Bruce
On Thu, 28 Apr 2011, Pedro Paulo de Magalhães Oliveira Junior wrote:
Some months ago it was asked in this list how to make a Movie of he
process of the inflation of the brain.
Some hints:
Create this tcl script and name it as script.tcl:
for {set x 0} {$x<120} {incr x} { set r [expr (round(1.2*$x + 3))] shrink $r redraw save_tiff ${x}-img.tif } exit
Then use the commands: tksurfer bert lh pial -annotation aparc.annot -tcl script.tcl ffmpeg -r 15 -b 2500 -sameq -i %d-img.tif videoOutput.mp4
You can check the results at: http://www.youtube.com/watch?v=aj-d8PZMXt8
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you can use -w in most binaries, including mris_sphere On Thu, 28 Apr 2011, Pedro Paulo de Magalhães Oliveira Junior wrote:
easier.
Can you inflate until you get the sphere?
2011/4/28 Bruce Fischl fischl@nmr.mgh.harvard.edu
or you can save snapshots from mris_inflate with
mris_inflate -w 1 -scale 1 ...
then render each of the resulting surfaces. cheers, Bruce
On Thu, 28 Apr 2011, Pedro Paulo de Magalhães Oliveira Junior wrote:
Some months ago it was asked in this list how to make a Movie of he
process of the inflation of the brain.
Some hints:
Create this tcl script and name it as script.tcl:
for {set x 0} {$x<120} {incr x} { set r [expr (round(1.2*$x + 3))] shrink $r redraw save_tiff ${x}-img.tif } exit
Then use the commands: tksurfer bert lh pial -annotation aparc.annot -tcl script.tcl ffmpeg -r 15 -b 2500 -sameq -i %d-img.tif videoOutput.mp4
You can check the results at: http://www.youtube.com/watch?v=aj-d8PZMXt8
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
freesurfer@nmr.mgh.harvard.edu
-
Bruce Fischl -
Pedro Paulo de Magalhães Oliveira Junior