Dear FreeSurfer experts,
Thanks again for a great FreeSurfer forum.
I have been trying to run the linear mixed effects model on a longitudinal dataset. However, i get the an error in matlab: "matlabpool has been removed. Use PARPOOL instead". I can see in the forum that others have experienced the same. Unfortunately i cannot find the answer, which fixes the problem. As far as i understand, it may be because i am using a new version of Matlab. However, is there a way to fix the problem?
Best regards, Kasper Jessen MD, PhD student
Hi Kaspar,
I had the same problem. The last version that supports matlabpool is Matlab 8.2. Maybe try it with that version.
Cheers, Clara
----- Ursprüngliche Mail ----- Von: "Kasper Jessen" kasper_j@cnsr.dk An: "Freesurfer support list" freesurfer@nmr.mgh.harvard.edu Gesendet: Mittwoch, 23. März 2016 09:41:51 Betreff: [Freesurfer] Matlabpool has been removed
Dear FreeSurfer experts,
Thanks again for a great FreeSurfer forum.
I have been trying to run the linear mixed effects model on a longitudinal dataset. However, i get the an error in matlab: "matlabpool has been removed. Use PARPOOL instead". I can see in the forum that others have experienced the same. Unfortunately i cannot find the answer, which fixes the problem. As far as i understand, it may be because i am using a new version of Matlab. However, is there a way to fix the problem? Best regards, Kasper Jessen MD, PhD student
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Hi Clara, Your right, an older version of Matlab, could be a solution. However, i am thinking that there must be a fix? Cheers, Kasper
2016-03-23 11:16 GMT+01:00 Clara Kühn ckuehn@cbs.mpg.de:
Hi Kaspar,
I had the same problem. The last version that supports matlabpool is Matlab 8.2. Maybe try it with that version.
Cheers, Clara
----- Ursprüngliche Mail ----- Von: "Kasper Jessen" kasper_j@cnsr.dk An: "Freesurfer support list" freesurfer@nmr.mgh.harvard.edu Gesendet: Mittwoch, 23. März 2016 09:41:51 Betreff: [Freesurfer] Matlabpool has been removed
Dear FreeSurfer experts,
Thanks again for a great FreeSurfer forum.
I have been trying to run the linear mixed effects model on a longitudinal dataset. However, i get the an error in matlab: "matlabpool has been removed. Use PARPOOL instead". I can see in the forum that others have experienced the same. Unfortunately i cannot find the answer, which fixes the problem. As far as i understand, it may be because i am using a new version of Matlab. However, is there a way to fix the problem? Best regards, Kasper Jessen MD, PhD student
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
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Hi Kasper,
the fix is that someone needs to sit down and port all matlabpool to parpool, which is straightforward. It needs to be done in a way that is backward compatible, as not everyone has the new version of Matlab. Maybe someone on the list want's to take this on, should only be a couple hours or a day with matlab experience.
Cheers, Martin
On 03/23/2016 06:57 AM, Kasper Jessen wrote:
Hi Clara, Your right, an older version of Matlab, could be a solution. However, i am thinking that there must be a fix? Cheers, Kasper
2016-03-23 11:16 GMT+01:00 Clara Kühn <ckuehn@cbs.mpg.de mailto:ckuehn@cbs.mpg.de>:
Hi Kaspar, I had the same problem. The last version that supports matlabpool is Matlab 8.2. Maybe try it with that version. Cheers, Clara ----- Ursprüngliche Mail ----- Von: "Kasper Jessen" <kasper_j@cnsr.dk <mailto:kasper_j@cnsr.dk>> An: "Freesurfer support list" <freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu>> Gesendet: Mittwoch, 23. März 2016 09:41:51 Betreff: [Freesurfer] Matlabpool has been removed Dear FreeSurfer experts, Thanks again for a great FreeSurfer forum. I have been trying to run the linear mixed effects model on a longitudinal dataset. However, i get the an error in matlab: "matlabpool has been removed. Use PARPOOL instead". I can see in the forum that others have experienced the same. Unfortunately i cannot find the answer, which fixes the problem. As far as i understand, it may be because i am using a new version of Matlab. However, is there a way to fix the problem? Best regards, Kasper Jessen MD, PhD student _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer-- Kasper Jessen, MD, PhD student Center for neuropsychiatric Schizophrenia Research (CNSR) Mental Health Centre Glostrup Nordre Ringvej 29-67 2600 Glostrup Tlf.: 24430136 E-mail: kasper_j@cnsr.dk mailto:kasper_j@cnsr.dk eller kasper.jessen@regionh.dk mailto:kasper.jessen@regionh.dk
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Clara Kühn -
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Martin Reuter