Hi Marina

not with our default tools. Koen (ccd) has something that will generate this, but it is not run by default.

cheers Bruce

On Thu, 6 Jun 2019, Marina Fernández wrote:

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Dear Freesurfer experts, Is there any way to obtain a CSF mask in Freesurfer similar to that  obtained with the SPM segmentation (see attached)?

Thank you in advance.

Best regards, Marina.