FreeSurfer experts, May you please educate me how the supra tentorial volume (STV) measured by FreeSurfer and which date does it take as input file to calculate this variable. Thanks, Rashmi
Hi Rashmi, This page has the definition you are looking for (FS v5.3).
https://surfer.nmr.mgh.harvard.edu/fswiki/MorphometryStats
-Louis
On Thu, 7 Nov 2013, Rashmi Singh wrote:
FreeSurfer experts, May you please educate me how the supra tentorial volume (STV) measured by FreeSurfer and which date does it take as input file to calculate this variable. Thanks, Rashmi
Can you tell me what is the input file that free surfer used to calculate STV. I am not sure the webpage below gives that information. Thanks, Rashmi
On 11/7/13 1:57 PM, "Louis Nicholas Vinke" vinke@nmr.mgh.harvard.edu wrote:
Hi Rashmi, This page has the definition you are looking for (FS v5.3).
https://surfer.nmr.mgh.harvard.edu/fswiki/MorphometryStats
-Louis
On Thu, 7 Nov 2013, Rashmi Singh wrote:
FreeSurfer experts, May you please educate me how the supra tentorial volume (STV) measured by FreeSurfer and which date does it take as input file to calculate this variable. Thanks, Rashmi
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Here is the recon-all table for 5.1, see the segstats step. You can also search for that flag in the recon-all script and see what input/flags are passed to mri_segstats.
https://surfer.nmr.mgh.harvard.edu/fswiki/ReconAllTableStableV5.1
On Thu, 7 Nov 2013, Rashmi Singh wrote:
Can you tell me what is the input file that free surfer used to calculate STV. I am not sure the webpage below gives that information. Thanks, Rashmi
On 11/7/13 1:57 PM, "Louis Nicholas Vinke" vinke@nmr.mgh.harvard.edu wrote:
Hi Rashmi, This page has the definition you are looking for (FS v5.3).
https://surfer.nmr.mgh.harvard.edu/fswiki/MorphometryStats
-Louis
On Thu, 7 Nov 2013, Rashmi Singh wrote:
FreeSurfer experts, May you please educate me how the supra tentorial volume (STV) measured by FreeSurfer and which date does it take as input file to calculate this variable. Thanks, Rashmi
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
freesurfer@nmr.mgh.harvard.edu
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Louis Nicholas Vinke -
Rashmi Singh